Information for 1-CCTCGGCTTTTTC (Motif 1)

A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C
Reverse Opposite:
A T C G G T C A C G T A C G T A C G T A C G T A C T A G A G T C G T A C T C A G G T C A C T A G T A C G
p-value:1e-14
log p-value:-3.343e+01
Information Content per bp:1.764
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 24.7bp
Average Position of motif in Background53.5 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTCGGCTTTTTC
TACTTCCGCTTTTT-
 A C G T A C G T A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCTCGGCTTTTTC
---GGGGATTTCC
 A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCTCGGCTTTTTC
GGGGCCGAGGCCTG---
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCTCGGCTTTTTC
---GGGAATTTCC
 A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTCGGCTTTTTC
---GGGGATTTCC
 A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CCTCGGCTTTTTC--
--------TTTTCCA
 A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCTCGGCTTTTTC
TACTTCCTCTTTTN-
 A C G T A C G T A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGGCTTTTTC--
NNATTGGACTTTNGNN
 A C G T A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CCTCGGCTTTTTC----
-------ATTTTCCATT
 A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCTCGGCTTTTTC------
-----NNTTTTTCTTATNT
 A G T C A G T C A C G T A G T C A C T G A C T G A G T C G C A T A C G T A C G T A C G T A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T