Information for 6-GCCTGGCTGAGCG (Motif 7)

A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A T G C C G T A A C T G A G T C A G T C C G T A A C T G A C T G A T G C
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.946
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.9 +/- 27.5bp
Average Position of motif in Background52.2 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCCTGGCTGAGCG
GTCATGCHTGRCTGS---
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGCTGAGCG-
AGGATGACTCAGCAC
 A C G T A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G A C G T
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCTGGCTGAGCG
TGCTGASTCAGC-
 A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCCTGGCTGAGCG
NGTCACGCTTGGCTGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCCTGGCTGAGCG
---TGACTCAGCA
 A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

Nfe2l2/MA0150.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGCTGAGCG
CAGCATGACTCAGCA
 A C G T A C G T A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCTGGCTGAGCG
--CCTGCTGAGH-
 A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCTGGCTGAGCG
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCCTGGCTGAGCG-
--ATGACTCAGCAD
 A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G A C G T
A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCCTGGCTGAGCG
----NGCTN----
 A T C G A G T C G T A C A C G T A C T G A C T G A G T C A C G T A T C G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T