Information for 8-AAASYCACAAAAR (Motif 16)

T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C G T A C G T A C T G A G C T A C T G C T A G A T G C A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.857e+01
Information Content per bp:1.786
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.2 +/- 26.1bp
Average Position of motif in Background49.7 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAASYCACAAAAR
-AAACCACAGAN-
 T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAASYCACAAAAR
-AAACCACANN--
 T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAASYCACAAAAR-------
GAAGTANCACGAATNMRAGT
 T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAASYCACAAAAR
TCCAATCCACA----
 A C G T A C G T T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAASYCACAAAAR---
CGAAGCACACAAAATA
 T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAASYCACAAAAR
-AAACCGCAAA--
 T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAASYCACAAAAR---
AGAGCCATAAAATTCG
 T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAASYCACAAAAR
SSAATCCACANN--
 A C G T T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAASYCACAAAAR
-AAGCCATAAAA-
 T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A
A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAASYCACAAAAR-
AAAAATAACAAACGG
 A C G T T C G A G T C A C G T A A T C G A G T C G T A C T C G A A G T C C G T A T C G A C G T A C G T A C T G A A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G