Information for 6-TWYGACCCTRTCC (Motif 8)

A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A G A C T C G T A A C T G A C T G A C T G C G A T G T A C C T A G C G T A C G T A
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 25.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TWYGACCCTRTCC----
-GAGCCCTTGTCCCTAA
 A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TWYGACCCTRTCC-
--TGACCTTGACCT
 A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C A C G T
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TWYGACCCTRTCC
-AAGACCCYYN--
 A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TWYGACCCTRTCC-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TWYGACCCTRTCC
--TGACCT-----
 A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TWYGACCCTRTCC-
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TWYGACCCTRTCC-
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TWYGACCCTRTCC-
--TGACCTTGACCT
 A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C A C G T
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TWYGACCCTRTCC-
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TWYGACCCTRTCC
--TGACCYCT---
 A C G T C G A T A G T C A C T G C G T A A G T C A G T C A G T C A C G T C T A G A C G T A G T C A G T C
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T