Information for 4-TAKGGTTTCTSYC (Motif 7)

A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C
Reverse Opposite:
C T A G C T A G A T G C C G T A A C T G C G T A T G C A C T G A G A T C T A G C G T C A A G C T G T C A
p-value:1e-12
log p-value:-2.968e+01
Information Content per bp:1.714
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.0 +/- 21.2bp
Average Position of motif in Background47.4 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAKGGTTTCTSYC
--VBSYGTCTGG-
 A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAKGGTTTCTSYC
--TGGTTTCAGT-
 A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TAKGGTTTCTSYC
ACTTTCGTTTCT---
 A C G T A C G T A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TAKGGTTTCTSYC----
-----TGTCTGDCACCT
 A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAKGGTTTCTSYC-
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TAKGGTTTCTSYC--
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAKGGTTTCTSYC
TNTTATCTTATCTT--
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TAKGGTTTCTSYC----
----CTGTCTGTCACCT
 A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TAKGGTTTCTSYC
--TCTTATCTCCC
 A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C
A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TAKGGTTTCTSYC----
NNTNNTGTCTGGNNTNG
 A C G T C T G A A C G T A C T G C T A G A G C T A C G T A C G T A G T C C G A T A T C G A G T C A G T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G