Information for 3-YATMAGRRAACWC (Motif 5)

A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C G T G A T C A G C T A G T C A C G T A C T G C G T A A C G T C T A G
p-value:1e-13
log p-value:-3.158e+01
Information Content per bp:1.855
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.3 +/- 17.6bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YATMAGRRAACWC
--AAAGTAAACA-
 A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YATMAGRRAACWC
--AAAGTAAACA-
 A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-YATMAGRRAACWC
AAATAAGAAAAAAC
 A C G T A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YATMAGRRAACWC
--WAAGTAAAYA-
 A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--YATMAGRRAACWC
AAGATAAGATAACA-
 A C G T A C G T A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YATMAGRRAACWC--
CAAAAGTAAACAAAG
 A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:YATMAGRRAACWC
-NACAGGAAAT--
 A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:YATMAGRRAACWC-
--TATGTAAACANG
 A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:YATMAGRRAACWC
NCTAAGTAAACA-
 A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:YATMAGRRAACWC--
-----GGAAATTCCC
 A G T C C G T A A C G T T G A C C G T A C T A G C T G A C T A G C G T A C G T A A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C