Information for 24-CTCAGGGCCACTAGCA (Motif 41)

G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T C T G A A C T G A C G T A T C G A C T G A G T C A G T C A G T C A G C T A C T G C G T A A C T G
p-value:1e-6
log p-value:-1.429e+01
Information Content per bp:1.914
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.5 +/- 8.4bp
Average Position of motif in Background20.0 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTCAGGGCCACTAGCA
AGCTCGGCGCCAAAAGC-
 A C G T A C G T G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTCAGGGCCACTAGCA
NTCAAGGTCA------
 G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGGGCCACTAGCA
GCCTCAGGGCAT------
 A C G T A C G T G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTCAGGGCCACTAGCA-----
-AADGAGVCANYASTACAGNC
 G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTCAGGGCCACTAGCA
BTCAAGGTCA------
 G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTCAGGGCCACTAGCA
----RGGGCACTAACY
 G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CTCAGGGCCACTAGCA
AAGTTCAAGGTCAGC----
 A C G T A C G T A C G T G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CTCAGGGCCACTAGCA
----AGGTCTCTAACC
 G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CTCAGGGCCACTAGCA
--CAAGGHCANV----
 G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CTCAGGGCCACTAGCA
CCTTCGGCGCCAAAAGG-
 A C G T A C G T G T A C C G A T A G T C C T G A A C T G C T A G A C T G A G T C A T G C G T C A A G T C A G C T C G T A A C T G A G T C C G T A
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T