Information for 2-CTSRYYYMRGCAT (Motif 4)

A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T
Reverse Opposite:
T C G A G A C T A C T G G T A C A G C T A C T G T C G A C T A G C T A G G A C T T A C G C G T A A C T G
p-value:1e-14
log p-value:-3.285e+01
Information Content per bp:1.765
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 24.5bp
Average Position of motif in Background39.8 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTSRYYYMRGCAT
ACATGCCCGGGCAT
 A C G T A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTSRYYYMRGCAT---
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T A C G T A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTSRYYYMRGCAT-
GGGGCCGAGGCCTG
 A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTSRYYYMRGCAT---
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTSRYYYMRGCAT---
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CTSRYYYMRGCAT---
-----GTCAGCANNTN
 A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

TP53/MA0106.3/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTSRYYYMRGCAT---
GACATGCCCGGGCATGTT
 A C G T A C G T A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T A C G T A C G T A C G T
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTSRYYYMRGCAT
-TGAATTATGCAT
 A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T
A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTSRYYYMRGCAT---
NNNGCATGTCNNGACATGCN
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T A C G T A C G T A C G T
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CTSRYYYMRGCAT---
----NGTCAGCANTTT
 A G T C A C G T A T G C C T G A G A T C G A T C A G C T T G A C C T G A A C T G A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T