Information for 22-GTTCCGAAGGTCC (Motif 39)

A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C T G C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.429e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 22.2bp
Average Position of motif in Background46.1 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0115.1_Ehf_2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTTCCGAAGGTCC
TAGTATTTCCGATCTT--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTTCCGAAGGTCC-
AAGGTCAAAAGGTCAA
 A C G T A C G T A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTTCCGAAGGTCC-
----TCAAGGTCAT
 A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTTCCGAAGGTCC
NNCGTTGCTATGGNN-
 A C G T A C G T A C G T A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTTCCGAAGGTCC-
----TCAAGGTCAN
 A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GTTCCGAAGGTCC---
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

RARA/MA0729.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTTCCGAAGGTCC---
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

Rarb/MA0857.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTTCCGAAGGTCC
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTTCCGAAGGTCC-
----CAAAGGTCAG
 A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTTCCGAAGGTCC
GAGGTCAAAAGGTCA
 A C G T A C G T A C T G A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C T G A C T G A C G T A G T C A G T C
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A