Information for 20-GGCGCGAMGGGCA (Motif 37)

A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A G T C A C G T A G C T A T G C A C T G A G T C A C T G A G T C A T G C
p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.857
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 19.7bp
Average Position of motif in Background63.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCGAMGGGCA
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCGAMGGGCA
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCGAMGGGCA
TGGGGCAAAGGTCA
 A C G T A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGCGCGAMGGGCA-
----CAAAGGTCAG
 A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCGCGAMGGGCA
TAGGGCAAAGGTCA
 A C G T A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCGCGAMGGGCA
GGGCGGGAAGG---
 A C G T A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCGCGAMGGGCA
GTAGGGCAAAGGTCA
 A C G T A C G T A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGCGCGAMGGGCA--
-----CAAGGHCANV
 A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

E2F1/MA0024.3/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCGCGAMGGGCA
TTTGGCGCCAAA----
 A C G T A C G T A C G T A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCGCGAMGGGCA-
GCCGCGCAGTGCGT
 A T C G A C T G G T A C A C T G A G T C A T C G T C G A G T C A A C T G A C T G T C A G A G T C C G T A A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T