Information for 9-CACGAAGTCC (Motif 36)

A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C A C G T C G A T A G T C A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.959
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.2 +/- 16.5bp
Average Position of motif in Background77.2 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACGAAGTCC
GCACGTACCC-
 A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACGAAGTCC
AACAGGAAGT--
 A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACGAAGTCC
ACAGGAAGTG-
 A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACGAAGTCC
ACAGGAAGTG-
 A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACGAAGTCC
ANCAGGAAGT--
 A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACGAAGTCC
BGCACGTA----
 A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACGAAGTCC
GCACGTNC---
 A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACGAAGTCC
NACAGGAAAT--
 A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACGAAGTCC
GCACGTAY---
 A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACGAAGTCC
TBGCACGCAA---
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A C G T A G T C A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T