Information for 20-ARGCAGSTSCMSAGTG (Motif 31)

G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
Reverse Opposite:
G T A C C G T A A G T C A C G T A T C G A C T G C T A G A T C G C G T A A T C G A G T C A C G T A C T G A G T C A G C T A C G T
p-value:1e-8
log p-value:-1.850e+01
Information Content per bp:1.738
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.5 +/- 15.7bp
Average Position of motif in Background54.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ARGCAGSTSCMSAGTG
SDGCAGGTGCNS----
 G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ARGCAGSTSCMSAGTG
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ARGCAGSTSCMSAGTG
-AGCAGCTGCT-----
 G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ARGCAGSTSCMSAGTG
NNAGCAGCTGCT-----
 A C G T G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ARGCAGSTSCMSAGTG
-GACAGCTGCAG----
 G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ARGCAGSTSCMSAGTG
CAGCAGCTGN------
 G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ARGCAGSTSCMSAGTG
NGNGACAGCTGCN-----
 A C G T A C G T G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ARGCAGSTSCMSAGTG
-CGCAGCTGCG-----
 G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ARGCAGSTSCMSAGTG
-AACAGCTGCAG----
 G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ARGCAGSTSCMSAGTG
-GACAGGTGTN-----
 G T C A C T G A A C T G G T A C G T C A C T A G A T G C A C G T A T G C A G T C G T A C A T G C G T C A T C A G A C G T C A T G
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T