Information for 18-TTAATGGAGAACAGCA (Motif 29)

A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C T G A C G T A C G T A G T C C G A T A G T C A G T C C G T A A C G T A G C T C G T A G T C A
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 33.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTAATGGAGAACAGCA
-TAATGGCGGNC----
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTAATGGAGAACAGCA
GKTAATGR---------
 A C G T A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TTAATGGAGAACAGCA
----GGGAGGACNG--
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTAATGGAGAACAGCA
CTAATKGV--------
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTAATGGAGAACAGCA-----
------GAGCACAGCAGGACA
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TTAATGGAGAACAGCA
------TGGAACAGMA
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

NKX6-2/MA0675.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTAATGGAGAACAGCA
TTAATTAN--------
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTAATGGAGAACAGCA
TTGACCGAGAATTCC-
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTAATGGAGAACAGCA
NTAATTGN--------
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:TTAATGGAGAACAGCA
---------CACAGN-
 A C G T A C G T C T G A G T C A A C G T A C T G A C T G C G T A A C T G G T C A T C G A A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T