Information for 11-YCWCCCTYTCGSA (Motif 24)

A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C C T A G C T G A C T G A C G T A A C T G A C T G A C T G C G A T A C T G C T G A
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.2 +/- 11.1bp
Average Position of motif in Background62.9 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:YCWCCCTYTCGSA---
-ACCACTCTCGGTCAC
 A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--YCWCCCTYTCGSA
ANTTTCGCTTTCGN-
 A C G T A C G T A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---YCWCCCTYTCGSA
GCCCCGCCCC------
 A C G T A C G T A C G T A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----YCWCCCTYTCGSA
NRGCCCCRCCCHBNN---
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:YCWCCCTYTCGSA
-CRCCCACGCA--
 A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---YCWCCCTYTCGSA
CCCCCGCCCCCGCC--
 A C G T A C G T A C G T A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:YCWCCCTYTCGSA---
-AGTATTCTCGGTTGC
 A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--YCWCCCTYTCGSA-
NNAGTCCCACTCNNNN
 A C G T A C G T A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-YCWCCCTYTCGSA
YCCGCCCACGCN--
 A C G T A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---YCWCCCTYTCGSA
GCCMCRCCCH------
 A C G T A C G T A C G T A G C T A G T C C G T A A G T C A G T C A G T C A C G T A G C T A G C T A G T C A C T G A T C G C G T A
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T