Information for 2-GGCGCCCCCTGGCGGC (Motif 2)

A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C
Reverse Opposite:
A T C G A T G C A G T C C T A G A G T C A G T C C G T A A T C G A C T G A C T G A T C G A T C G A G T C A C T G A G T C A T G C
p-value:1e-14
log p-value:-3.426e+01
Information Content per bp:1.869
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.1 +/- 30.1bp
Average Position of motif in Background39.6 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GGCGCCCCCTGGCGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCCCCCTGGCGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGCGCCCCCTGGCGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGCGCCCCCTGGCGGC
--CGCCCCCTGACA--
 A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C
A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCGCCCCCTGGCGGC
--CACCCCCGGGGGGG
 A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGCGCCCCCTGGCGGC
--TGCCCCCGGGCA--
 A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGCGCCCCCTGGCGGC-----
----NNNNTTGGCGCCGANNN
 A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGCGCCCCCTGGCGGC-
--CCCCCCCGGGGGGGT
 A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGCGCCCCCTGGCGGC-----
----NNNNTTGGCGCCGANNN
 A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCCCCCTGGCGGC
ANCGCGCGCCCTTNN---
 A C G T A C G T A T C G C T A G A G T C A C T G A T G C A T G C G T A C A G T C A T G C A C G T A C T G A C T G A G T C A C T G A T C G A T G C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T A C G T