Information for 7-TCACAGCAGCGCC (Motif 15)

C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C T G G T C A
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 22.1bp
Average Position of motif in Background57.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCACAGCAGCGCC
-CACAGCAGGGGG
 C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCACAGCAGCGCC
AGCAACAGCCGCACC
 A C G T A C G T C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCACAGCAGCGCC
-CGCAGCTGCG--
 C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCACAGCAGCGCC
GAGCACAGCAGGACA
 A C G T A C G T C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCACAGCAGCGCC--
DCHCAGCAGGRGGCC
 C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCACAGCAGCGCC
CCACACAGCAGGAGA
 A C G T A C G T C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCACAGCAGCGCC
-CACAGN------
 C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCACAGCAGCGCC
CCGCATAGCAACGGA
 A C G T A C G T C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCACAGCAGCGCC
DCTCAGCAGG---
 C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCACAGCAGCGCC
CCACACAGCAGGAGA
 A C G T A C G T C A G T A G T C G T C A A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C T G A G T C A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A