Information for 8-GCGCAGGCGCCAAGGC (Motif 12)

A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
Reverse Opposite:
T C A G A T G C A G T C A G C T A C G T A C T G C T A G A G T C A T C G T A G C T A G C G A C T A C T G A G T C A C T G A T G C
p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.770
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.7 +/- 14.8bp
Average Position of motif in Background52.1 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAGGCGCCAAGGC
TGCGCAGGCGC------
 A C G T A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCGCAGGCGCCAAGGC
CTGCGCATGCGC------
 A C G T A C G T A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCGCAGGCGCCAAGGC
GTGCGCATGCGC------
 A C G T A C G T A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCGCAGGCGCCAAGGC
NCANGCGCGCGCGCCA----
 A C G T A C G T A C G T A C G T A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAGGCGCCAAGGC
NNNNTTGGCGCCGANNN
 A C G T A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCGCAGGCGCCAAGGC-
CCTTCGGCGCCAAAAGG
 A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCGCAGGCGCCAAGGC
--TTTGGCGCCAAA--
 A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCGCAGGCGCCAAGGC
---AGCGCGCC-----
 A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGCAGGCGCCAAGGC
SDGCAGGTGCNS----
 A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAGGCGCCAAGGC
TGCGTGGGCGT------
 A C G T A T C G A G T C A C T G A G T C C G T A A C T G A C T G A T G C A C T G A G T C A G T C T G C A T C G A C T A G A T C G A G T C
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T