Information for 4-CGTGTGCCWTCTYMTT (Motif 16)

A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C T G A C T G A A T C G C G T A C G A T A C T G A T C G A T G C G T C A A T G C G T C A A T G C T A C G
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.6 +/- 11.3bp
Average Position of motif in Background57.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGTGTGCCWTCTYMTT
--GCNGCCATCTTG--
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CGTGTGCCWTCTYMTT
-----GCCATCTGTT-
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGTGTGCCWTCTYMTT
-----ACCATCTGTT-
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGTGTGCCWTCTYMTT
--GCCGCCATCTTG--
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGTGTGCCWTCTYMTT------
-----GCAACCTCATTATNNNN
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGTGTGCCWTCTYMTT------
-----NNNACCTCATTATCNTN
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CGTGTGCCWTCTYMTT----
ANAGTGCCACCTGGTGGCCA
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGTGTGCCWTCTYMTT----
NNTGTTCTTTTTTGTTTACT
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CGTGTGCCWTCTYMTT---
--NNNTCCATCCCATAANN
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CGTGTGCCWTCTYMTT
---ATGCCAACC----
 A T G C A T C G A C G T A T C G C A G T A T C G A T G C A G T C C G T A A C G T A T G C A G C T G A C T G T C A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T