Information for 3-VAGKCCTCACCTGTCC (Motif 5)

T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
Reverse Opposite:
A T C G C T A G C T G A T A G C C G T A A C T G C T A G C G A T A C T G C T G A A C T G T A C G G T C A A T G C C G A T A C T G
p-value:1e-12
log p-value:-2.854e+01
Information Content per bp:1.763
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 19.7bp
Average Position of motif in Background47.7 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.79
Offset:4
Orientation:forward strand
Alignment:VAGKCCTCACCTGTCC
----CCTCACCTG---
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:VAGKCCTCACCTGTCC
-TGWCCTCARNTGACC
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.69
Offset:5
Orientation:forward strand
Alignment:VAGKCCTCACCTGTCC
-----NNCACCTGNN-
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.67
Offset:5
Orientation:forward strand
Alignment:VAGKCCTCACCTGTCC
-----CGCACCTGCT-
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:VAGKCCTCACCTGTCC
------NCACCTGTN-
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:VAGKCCTCACCTGTCC--
-NNTNCGCACCTGTNGAN
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C A C G T A C G T
A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.66
Offset:4
Orientation:forward strand
Alignment:VAGKCCTCACCTGTCC
----SNGCACCTGCHS
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:VAGKCCTCACCTGTCC
----RYHYACCTGB--
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.65
Offset:5
Orientation:forward strand
Alignment:VAGKCCTCACCTGTCC
-----TACACCTGTC-
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:forward strand
Alignment:VAGKCCTCACCTGTCC
-----AACACCTGCT-
 T G A C C G T A T A C G C A G T A T G C A G T C A G C T A G T C G C T A A G T C A G T C A C G T A T C G A G C T G A T C A T G C
A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T