Information for 14-TTTCATAGCC (Motif 45)

A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.221e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.7 +/- 11.1bp
Average Position of motif in Background51.6 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTCATAGCC
TTTAATTGCN
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PH0056.1_Hoxa9/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCATAGCC--
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTCATAGCC
CCTTTTATAGNC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTCATAGCC--
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATAGCC---
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTCATAGCC-
TTTTATGGCTN
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATAGCC
NTTTTATTACN
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

PH0012.1_Cdx1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATAGCC---
NAATTTTATTACCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTCATAGCC
TTTAAT----
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATAGCC
TTTTTATTGC-
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T