Information for 21-CGACATGTGCGCT (Motif 40)

A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A T C G A G T C C G T A A G T C G T C A A C G T A C T G A G C T A G T C A T C G
p-value:1e-7
log p-value:-1.707e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 15.5bp
Average Position of motif in Background25.5 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CGACATGTGCGCT
TAACGACACGTGC---
 A C G T A C G T A C G T A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGACATGTGCGCT--
ATCCACAGGTGCGAAAA
 A C G T A C G T A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGACATGTGCGCT
--CCATGTGCTT-
 A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGACATGTGCGCT
-GACACGTGCC--
 A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGACATGTGCGCT
-NACACGTGCN--
 A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGACATGTGCGCT
-NNCAGGTGCG--
 A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGACATGTGCGCT
-AACAGGTGT---
 A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGACATGTGCGCT
-GACAGGTGTN--
 A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGACATGTGCGCT
SDGCAGGTGCNS-
 A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGACATGTGCGCT
-GTCATGTGACC-
 A T G C A C T G C T G A A G T C C G T A A C G T A C T G A C G T A C T G A T G C A C T G A G T C A C G T
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T