Information for 16-GCCCKCATGCGTG (Motif 33)

A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
Reverse Opposite:
A G T C C T G A T A G C A T C G A T G C G T C A C A G T A C T G T G A C C A T G A T C G A T C G T G A C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.684
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif145.7
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets55.2 +/- 24.2bp
Average Position of motif in Background50.8 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCCKCATGCGTG
TACCCGCATN----
 A C G T A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCCKCATGCGTG-
GTCATGCHTGRCTGS
 A C G T A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCCCKCATGCGTG
TCGTACCCGCATCATT-
 A C G T A C G T A C G T A C G T A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCCKCATGCGTG
GTACCCGCATN----
 A C G T A C G T A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCCKCATGCGTG
CTGCCCGCA------
 A C G T A C G T A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCKCATGCGTG---
TGCAGTCATGCGTGACG
 A C G T A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G A C G T A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCCKCATGCGTG
ATGCCCTGAGGC---
 A C G T A C G T A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCKCATGCGTG
TGCCCCCGGGCA--
 A C G T A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GCCCKCATGCGTG
-------TGCGTG
 A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCCKCATGCGTG
GTGCGCATGCGC-
 A C T G A T G C A T G C G A T C A C T G G T A C G T C A A C G T A T C G T A G C A T C G A G C T C T A G
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T