Information for 9-TGGAAACTCGTTTTCT (Motif 17)

C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
Reverse Opposite:
C G T A A C T G C G T A C G T A G C T A G C T A A T G C C A T G G T C A A C T G A C G T A C G T A G C T G T A C G A T C G C T A
p-value:1e-10
log p-value:-2.416e+01
Information Content per bp:1.680
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif27.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.3 +/- 28.4bp
Average Position of motif in Background52.6 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGAAACTCGTTTTCT
ATGGAAAGTCGTAAAA-
 A C G T C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGAAACTCGTTTTCT--
-GAAAACTAGTTAACATC
 C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T A C G T A C G T
A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAACTCGTTTTCT
AATGGAAAAT--------
 A C G T A C G T C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGAAACTCGTTTTCT
--NAAACCGGTTTT--
 C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
A C G T A C G T G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGAAACTCGTTTTCT--
-AAAACATCGTTTTTAAG
 C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T A C G T A C G T
A C G T C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAACTCGTTTTCT
AATGGAAAAT--------
 A C G T A C G T C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAACTCGTTTTCT
NATGGAAAAN--------
 A C G T A C G T C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAACTCGTTTTCT
NNTGGAAANN--------
 A C G T A C G T C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGGAAACTCGTTTTCT
TGGAAAA---------
 C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TGGAAACTCGTTTTCT
---AAACCGGTTT---
 C G A T C T A G A C T G C T G A G T C A C G T A T A G C A C G T G T A C A T C G C G A T C A G T A C G T G C A T G T A C C G A T
A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T A C G T