Information for 17-CTTCGTTCATCCT (Motif 32)

A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A C G A T A C T G C G T A C G T A G T A C A C T G C G T A C G T A A C T G
p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.958
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 21.9bp
Average Position of motif in Background61.9 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTCGTTCATCCT
NNCATTCATTCATNNN
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTCGTTCATCCT-----
-NTTGTTAATCCCTCTNN
 A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTCGTTCATCCT
YCTTTGTTCC----
 A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTTCGTTCATCCT----
AATCGTTAATCCCTTTA
 A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTCGTTCATCCT
GCTTCC--------
 A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTTCGTTCATCCT
-----TTAATCCT
 A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTTCGTTCATCCT
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTTCGTTCATCCT-
----NYTAATCCYB
 A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTCGTTCATCCT-----
-ATAGTTAATCCCCCNNA
 A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTTCGTTCATCCT
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T