Information for 6-CTGACCTCCA (Motif 31)

A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A
Reverse Opposite:
A C G T C T A G T A C G C G T A T A C G C T A G A G C T G T A C G T C A T A C G
p-value:1e-7
log p-value:-1.715e+01
Information Content per bp:1.657
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.75%
Number of Background Sequences with motif735.8
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets48.5 +/- 30.8bp
Average Position of motif in Background51.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CTGACCTCCA
-TGACCYCT-
 A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTGACCTCCA-
-TGACCTTGAT
 A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTGACCTCCA
-TGACCT---
 A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTGACCTCCA
-TGACCTYA-
 A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTGACCTCCA
GTGACCTT--
 A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGACCTCCA
NTGACCTTGA
 A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCTCCA
CNNTTGACCTTTG
 A C G T A C G T A C G T A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTGACCTCCA---
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CTGACCTCCA---
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGACCTCCA
ATGACCTTGA
 A T G C C A G T A C T G T C G A G A T C A T G C G C A T A T G C G A T C G T C A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A