Information for 2-CCAAGTTTTCATTCTG (Motif 3)

A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G
Reverse Opposite:
A G T C G T C A T A C G C G T A G T C A A C G T C A T G T G C A C G T A C G T A G C T A A T G C A G C T C A G T A T C G T A C G
p-value:1e-16
log p-value:-3.880e+01
Information Content per bp:1.735
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.9 +/- 21.2bp
Average Position of motif in Background74.0 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAAGTTTTCATTCTG-----
---NAGTTTCABTHTGACTNW
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCAAGTTTTCATTCTG----
-----CTTTCANTATGACTV
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCAAGTTTTCATTCTG
---TGGTTTCAGT---
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAAGTTTTCATTCTG--
--NNAATTTTATTGGNTN
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G A C G T A C G T
A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCAAGTTTTCATTCTG
---ATTTTCCATT---
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCAAGTTTTCATTCTG
------TTTAAT----
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCAAGTTTTCATTCTG
-CAAGCTT--------
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCAAGTTTTCATTCTG
-----TTTTTATTGG-
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G
A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAAGTTTTCATTCTG
--CAGTTTCGNTTCTN
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G
A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCAAGTTTTCATTCTG
-----NTTTTATTGG-
 A G T C T A G C G T C A C T G A A T C G C A G T A C G T A C G T A C G T G T A C G T C A A C G T C G A T A T G C C A G T A C T G
A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T