Information for 8-AGGGSMSCTCCYG (Motif 15)

C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
Reverse Opposite:
A G T C C T A G A C T G A C T G C G T A A C T G A T G C A C G T A T C G G T A C A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 24.4bp
Average Position of motif in Background56.4 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGGSMSCTCCYG-
NNNGGGGCGCCCCCNN
 A C G T A C G T C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGGSMSCTCCYG
NGGGGATTTCCC-
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGGSMSCTCCYG
-GGGGATTTCC--
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGGSMSCTCCYG
--CNGTCCTCCC-
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGGGSMSCTCCYG
------GCTCCG-
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGGSMSCTCCYG
AGGGGAATCCCCT
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGGSMSCTCCYG
-GGGGATTTCC--
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGGSMSCTCCYG
-GGGAATTTCC--
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGGSMSCTCCYG
AGGGGAATCCCCT
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGGSMSCTCCYG
-GGGAATTTCC--
 C G T A A C T G A C T G A C T G A T G C G T C A A T C G G T A C A C G T A G T C A G T C A G T C C T A G
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T