Information for 3-SCAGGCCTGCGCG (Motif 11)

A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C C T A G A T G C T C G A A C T G A C T G A G T C A G T C A C G T A C T G A T C G
p-value:1e-12
log p-value:-2.814e+01
Information Content per bp:1.828
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.6 +/- 15.7bp
Average Position of motif in Background43.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:SCAGGCCTGCGCG
CNAGGCCT-----
 A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:SCAGGCCTGCGCG--
-CAGGCCNNGGCCNN
 A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:SCAGGCCTGCGCG
CTAGGCCT-----
 A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SCAGGCCTGCGCG
--GCGCCTGCGCA
 A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:SCAGGCCTGCGCG-
ACATGCCCGGGCAT
 A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:SCAGGCCTGCGCG-----
---TGCCTGCGYCMCCTT
 A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:SCAGGCCTGCGCG--
-NNGCNCTGCGCGGC
 A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G A C G T A C G T
A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-SCAGGCCTGCGCG
AGCGCGCC------
 A C G T A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----SCAGGCCTGCGCG
NNGGCCACGCCTTTN--
 A C G T A C G T A C G T A C G T A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--SCAGGCCTGCGCG
TCCCAGMCRAGCCCC
 A C G T A C G T A T G C A G T C T C G A A C T G A C T G A G T C A G T C A G C T A T C G A G T C C T A G A G T C A T C G
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C