Information for 2-GRGCAGYKGGCSC (Motif 10)

A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
Reverse Opposite:
C T A G A T G C A C T G A G T C G T A C G T C A C T G A A G T C C G A T A C T G A G T C A G C T A G T C
p-value:1e-12
log p-value:-2.838e+01
Information Content per bp:1.865
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 13.5bp
Average Position of motif in Background68.2 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GRGCAGYKGGCSC
-AACAGATGGC--
 A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GRGCAGYKGGCSC
VNAVCAGCTGGC--
 A C G T A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GRGCAGYKGGCSC-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GRGCAGYKGGCSC
CACGGCAGTTGGTNN
 A C G T A C G T A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GRGCAGYKGGCSC
SDGCAGGTGCNS-
 A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GRGCAGYKGGCSC
-GACAGCTGCAG-
 A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GRGCAGYKGGCSC
-AGCAGCTGCTNN
 A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GRGCAGYKGGCSC
-NVCAGCTGBBNN
 A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GRGCAGYKGGCSC
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GRGCAGYKGGCSC
NGNGACAGCTGCN--
 A C G T A C G T A C T G C T G A A C T G A G T C C G T A A C T G A G C T A C G T A C T G A C T G A G T C A T C G A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T