Information for 6-TGGTTAAGGGCAT (Motif 9)

A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A G T C A G T C A G T C A C G T A C G T C G T A C G T A A G T C G T A C C G T A
p-value:1e-11
log p-value:-2.605e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 16.3bp
Average Position of motif in Background63.0 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGGTTAAGGGCAT
AGGTCAAGGTCA-
 A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGTTAAGGGCAT
AGGTCAAGGTCA-
 A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTAAGGGCAT---
NTNNTTAAGTGGTTANN
 A C G T A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGGTTAAGGGCAT
---TCAAGGTCAT
 A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGGTTAAGGGCAT
----TNNGGGCAG
 A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGGTTAAGGGCAT-
---TCAAGGTCATA
 A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T A C G T
A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGGTTAAGGGCAT
--TTCAAGGTCAT
 A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGGTTAAGGGCAT
ACTAGTTAAC-----
 A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGGTTAAGGGCAT
--BTCAAGGTCA-
 A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTAAGGGCAT
ACCGTTAACGGT--
 A C G T A C G T A C T G C T A G A C G T A C G T C G T A C G T A C T A G A C T G A C T G G T A C C G T A C G A T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T A C G T A C G T