Information for 4-CWAAAATTMWGTM (Motif 6)

A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
Reverse Opposite:
C A T G C G T A G T A C C G T A A C G T C G T A C G T A G C A T A G C T A G C T A G C T C G A T T C A G
p-value:1e-11
log p-value:-2.701e+01
Information Content per bp:1.638
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif421.2
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets54.7 +/- 22.6bp
Average Position of motif in Background48.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx3/MA0135.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CWAAAATTMWGTM---
---AAATTAATTAATC
 A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CWAAAATTMWGTM
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CWAAAATTMWGTM
NNCNNAACAATTNT---
 A C G T A C G T A C G T A C G T A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CWAAAATTMWGTM
----AATTATT--
 A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CWAAAATTMWGTM
NNNTAACAATTATAN-
 A C G T A C G T A C G T A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CWAAAATTMWGTM
-CCTAATTATC--
 A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CWAAAATTMWGTM
NNTNANAACAATTNNA--
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CWAAAATTMWGTM
---CAATTAA---
 A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CWAAAATTMWGTM
ATAAACAATTAAACA
 A C G T A C G T A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CWAAAATTMWGTM
TTAAGAACAATAAATT-
 A C G T A C G T A C G T A C G T A G T C G C T A C T G A C T G A T C G A C G T A A C G T C G A T G T C A G C A T C A T G G C A T G T A C
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T