Information for 17-GGGTGAGGGTCACAGG (Motif 37)

A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A G T C C G T A A T G C A G T C A G T C
p-value:1e-6
log p-value:-1.455e+01
Information Content per bp:1.908
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.3 +/- 28.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG---
----AGGGGTCAGAGGTCA
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG
AGGTCAAGGTCA----
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG
-----AGGGTAACAGC
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG---
-----GGGGTCAAAGGTCA
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG---
-----GAGGTCAAAGGTCA
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG---
-----GAGGTCAAAGGTCA
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG---
----GTAGGGCAAAGGTCA
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGGTGAGGGTCACAGG---
-----TGGGGCAAAGGTCA
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG---
-----GGGGTCAAAGGTCA
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGGTGAGGGTCACAGG---
-----GGGGTCAAAGGTCA
 A C T G A C T G A T C G A C G T A C T G C G T A A C T G A C T G C T A G G A C T A G T C C G T A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A