Information for 5-GTGCTCGGAGCTAGGT (Motif 12)

A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T
Reverse Opposite:
G T C A A T G C A G T C A C G T C T G A A C T G A T G C A G C T A G T C A G T C T A C G G C T A A C T G G T A C C G T A A T G C
p-value:1e-11
log p-value:-2.605e+01
Information Content per bp:1.760
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 13.0bp
Average Position of motif in Background69.4 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GTGCTCGGAGCTAGGT
-----CGGAGC-----
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTGCTCGGAGCTAGGT---
-----TTGACCTANTTATN
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GTGCTCGGAGCTAGGT
------TGACCTARTT
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GTGCTCGGAGCTAGGT
------AGGCCTAG--
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:GTGCTCGGAGCTAGGT---
---NNAGGGACAAGGGCNC
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

T/MA0009.2/Jaspar

Match Rank:6
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GTGCTCGGAGCTAGGT----
----TCACACCTAGGTGTGA
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:GTGCTCGGAGCTAGGT--
---BCNGGTTCTAGANCN
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:GTGCTCGGAGCTAGGT
TTTCTNAGAAAN----
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:GTGCTCGGAGCTAGGT
-TTCTTGGAAAN----
 A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-GTGCTCGGAGCTAGGT
RGKGGGCGGAGC-----
 A C G T A T C G C G A T A C T G A G T C C A G T A G T C C T A G A C T G C T G A A T C G A G T C A G C T C G T A C T A G A T C G A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T