Information for 4-AAGGGTTCAG (Motif 9)

C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G
Reverse Opposite:
G T A C A C G T T C A G T C G A G T C A T G A C G T A C A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.831
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif165.1
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets54.8 +/- 27.3bp
Average Position of motif in Background47.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAGGGTTCAG----
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAGGGTTCAG----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAGGGTTCAG----
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGGGTTCAG
-AGRGGTCA-
 C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAGGGTTCAG
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGGGTTCAG-
-TGGTTTCAGT
 C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGTTCAG
NTAATKGTTT--
 A C G T A C G T C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAGGGTTCAG
--NGGATTAN
 C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGGTTCAG--
NNNNTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGGTTCAG--
NNANTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G A C T G C A G T A G C T A G T C C G T A A C T G A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A