Information for 23-CAGGTTAGCT (Motif 42)

A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 9.4bp
Average Position of motif in Background21.4 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CAGGTTAGCT
CAGGTGAGG-
 A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGGTTAGCT
VCAGGTRDRY-
 A C G T A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAGGTTAGCT-
CAGGTAAGTAT
 A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGTTAGCT
AACAGGTGT---
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTTAGCT
NNCAGGTGNN--
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGTTAGCT-----
ACTTAGTTAACTAAAAA
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGGTTAGCT
-GGATTAGC-
 A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGTTAGCT-----
CCTTAGTTAACTAAAAT
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGGTTAGCT------
AGCTGTTAACTAGCCGT
 A C G T A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTTAGCT
NNCAGGTGCG--
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T