Information for 23-CCAWGRGMCTGSA (Motif 36)

A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C C G T A A C T G A C G T A T G C A G C T A G T C C G A T A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.5 +/- 27.3bp
Average Position of motif in Background48.1 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCAWGRGMCTGSA
ATTCCCAAGGGAAT---
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCAWGRGMCTGSA
GTGCCACGCGACTG--
 A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCAWGRGMCTGSA
GTCATGTGACC---
 A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCAWGRGMCTGSA
TCCCNNGGGACN---
 A C G T A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCAWGRGMCTGSA
GCCACGTGACC---
 A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCAWGRGMCTGSA
KCCACGTGAC----
 A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAWGRGMCTGSA
CCATGTGCTT---
 A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------CCAWGRGMCTGSA
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCAWGRGMCTGSA
ACCACGTGAC----
 A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCAWGRGMCTGSA
RTCATGTGAC----
 A C G T A G T C A G T C C G T A C G T A A C T G C T G A A T C G G T C A A G T C A C G T A C T G A T C G C G T A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T