Information for 2-CTATGTAGATGAGGCA (Motif 3)

A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C C G T A A C G T C G T A A C T G
p-value:1e-26
log p-value:-6.069e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.9 +/- 27.1bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTATGTAGATGAGGCA
-WATGCAAATGAG---
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTATGTAGATGAGGCA
AATATGCAAATTAG---
 A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CTATGTAGATGAGGCA--
-------GATGAGTCATN
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

JUND/MA0491.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTATGTAGATGAGGCA--
-------NATGAGTCACN
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTATGTAGATGAGGCA
-TATGCAAAT------
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTATGTAGATGAGGCA
-TATGCWAATBAV---
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:7
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CTATGTAGATGAGGCA---
-------GATGAGTCATCC
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CTATGTAGATGAGGCA-
-------GATGAGTCAT
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

ATF4/MA0833.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTATGTAGATGAGGCA---
------GGATGATGCAATA
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTATGTAGATGAGGCA
TTGTATGCAAATTAGA--
 A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A C T G A C T G A G T C C G T A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T