Information for 12-CCACAGTGGCTTT (Motif 18)

A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A T G C A G T C C T G A A G T C A C G T A C T G A C G T A T C G A C T G
p-value:1e-13
log p-value:-3.013e+01
Information Content per bp:1.934
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 25.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACAGTGGCTTT-
ATGTACAGTAGCAAAG
 A C G T A C G T A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCACAGTGGCTTT
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGTGGCTTT
AAACCACAGAN-----
 A C G T A C G T A C G T A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCACAGTGGCTTT-
ATTTACAGTAGCAAAA
 A C G T A C G T A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGTGGCTTT
AAACCACAGC------
 A C G T A C G T A C G T A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCACAGTGGCTTT
-CACAGN------
 A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCACAGTGGCTTT
NAAACCACAG-------
 A C G T A C G T A C G T A C G T A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCACAGTGGCTTT-
-----TTGACTTTT
 A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCACAGTGGCTTT
-AACAAAGG----
 A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCACAGTGGCTTT-
--ACAAAGGNBCCT
 A G T C T A G C C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T