Information for 24-AAAAAGAAGC (Motif 36)

C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C
Reverse Opposite:
A C T G A T G C C G A T A C G T A G T C G A C T C G A T A C G T C G A T A C G T
p-value:1e-6
log p-value:-1.496e+01
Information Content per bp:1.796
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif127.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets60.9 +/- 23.6bp
Average Position of motif in Background50.5 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAGAAGC---
GGAAANTGAAACTNA
 A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAAAAGAAGC
----NGAAGC
 C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAAAAGAAGC--
GAGAACCGAAACTG
 A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAGAAGC-
GAAAMTGAAACT
 A C G T C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAAAAGAAGC--
GGAGAAAGGTGCGA
 A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAGAAGC-
GAAACTGAAACT
 A C G T C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AAAAAGAAGC
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAAAAGAAGC--
ACAAAGGNBCCT
 C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C A C G T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAAAAGAAGC
ACAAAG----
 C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAAAGAAGC
ANCAGGAAGT
 C G T A C G T A C G T A C G T A C T G A C T A G T G C A C G T A T A C G A G T C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T