Information for 10-GCTCCGRCAGCGGGRT (Motif 20)

A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T
Reverse Opposite:
G T C A G A C T A G T C A G T C T A G C A T C G A T G C C G A T A T C G A G C T G T A C T A C G A C T G C G T A A C T G A G T C
p-value:1e-12
log p-value:-2.797e+01
Information Content per bp:1.774
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.4 +/- 16.2bp
Average Position of motif in Background47.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCGRCAGCGGGRT
GGCTCYAKCAYC-----
 A C G T A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTCCGRCAGCGGGRT
GCTCCG----------
 A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCGRCAGCGGGRT
NGCTN------------
 A C G T A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTCCGRCAGCGGGRT
GCTCGGSCTC------
 A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCTCCGRCAGCGGGRT---
----DCHCAGCAGGRGGCC
 A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCTCCGRCAGCGGGRT
----NAACAGCTGG--
 A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T
A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GCTCCGRCAGCGGGRT---
-----CACAGCGGGGGGTC
 A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GCTCCGRCAGCGGGRT-
-----CACAGCAGGGGG
 A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GCTCCGRCAGCGGGRT------
--GCCASCAGGGGGCGCYVNNG
 A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GCTCCGRCAGCGGGRT---
----NCGCAGCGGGGGGTC
 A C T G A G T C A C G T A G T C A G T C C A T G C T G A A T G C C G T A A T C G A T G C A T C G A C T G A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C