Information for 23-GTAATAATCTCCT (Motif 50)

A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T C G T A A G T C
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 28.6bp
Average Position of motif in Background59.5 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTAATAATCTCCT-
---CTAATCCTCTT
 A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0129.1_Otx1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTAATAATCTCCT--
NNNAATTAATCCCCNCN
 A C G T A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTAATAATCTCCT
---YTAATCCY--
 A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTAATAATCTCCT
GTTAATTANCTCNN
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTAATAATCTCCT
--AATAATT----
 A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTAATAATCTCCT
--CCTAATCCGC-
 A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTAATAATCTCCT--
GNNNATTAATCCCTNCN
 A C G T A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

MEOX2/MA0706.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTAATAATCTCCT
AGTAATTAAC----
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GTAATAATCTCCT
NTNAGGTAATTACCTT--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTAATAATCTCCT
GNTAATTANN----
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T A C G T A C G T