Information for 18-CGCACACTCG (Motif 48)

G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G
Reverse Opposite:
A G T C A C T G C G T A A C T G C G A T C A T G G A C T A C T G G T A C A C T G
p-value:1e-6
log p-value:-1.470e+01
Information Content per bp:1.734
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif316.0
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets53.0 +/- 24.9bp
Average Position of motif in Background51.4 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CGCACACTCG---
AGCGGCACACACGCAA
 A C G T A C G T A C G T G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCACACTCG
ACGCCCACGCA
 A C G T G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGCACACTCG
YCCGCCCACGCN
 A C G T A C G T G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCACACTCG-----
ACCACTCTCGGTCAC
 G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCACACTCG-----
NNAATTCTCGNTNAN
 G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCACACTCG
CRCCCACGCA
 G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

EGR4/MA0733.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCACACTCG---
TTACGCCCACGCATTT
 A C G T A C G T A C G T G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCACACTCG-----
AGTATTCTCGGTTGC
 G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G A C G T A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

EGR3/MA0732.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCACACTCG--
CTACGCCCACGCACT
 A C G T A C G T A C G T G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCACACTCG-
-AASCACTCAA
 G T A C A C T G T G A C C T G A G T A C C G T A A G T C G C A T A G T C C T A G A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A