Information for 10-AGCCACGCTA (Motif 42)

G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C A T C G C G A T A C T G A C T G A G T C A C G T
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.902
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif29.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.4 +/- 17.7bp
Average Position of motif in Background53.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGCCACGCTA---
GTGCCACGCGACTG
 A C G T G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGCCACGCTA
---CACGCA-
 G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCCACGCTA
TBGCACGCAA
 G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

SP4/MA0685.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCCACGCTA-----
TAAGCCACGCCCCCTTT
 A C G T A C G T G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCCACGCTA-
-GGCACGCGTC
 G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

CREB3L1/MA0839.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCACGCTA---
ATGCCACGTCATCA
 A C G T G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A A C G T A C G T A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGCCACGCTA
-----NGCTN
 G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGCCACGCTA---
NNGGCCACGCCTTTN
 A C G T A C G T G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0127.1_Gata6_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCCACGCTA--------
-GCGGCGATATCGCAGCG
 G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCCACGCTA
CGTGCCAAG---
 A C G T A C G T G T C A A C T G G T A C A G T C C G T A A T G C A C T G A G T C A C G T C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T