Information for 6-CTAAGCAGCG (Motif 30)

A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G C T A C T G G T A C A C G T A C G T C G T A A C T G
p-value:1e-10
log p-value:-2.309e+01
Information Content per bp:1.934
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 19.7bp
Average Position of motif in Background54.3 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0098.1_Lhx8/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CTAAGCAGCG---
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0097.1_Lhx6_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CTAAGCAGCG---
TCCACTAATTAGCGGTT
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTAAGCAGCG---
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G A C G T A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0034.1_Gbx2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTAAGCAGCG---
AGCGCTAATTAGCGATT
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G A C G T A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0031.1_Evx1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTAAGCAGCG---
AGAACTAATTAGTGGAC
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G A C G T A C G T A C G T
G C T A T C A G G C T A T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T A T C G T A C G C G T A T A G C

PH0155.1_Prrx2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTAAGCAGCG---
AAAGCTAATTAGCGAAA
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PH0027.1_Emx2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTAAGCAGCG---
ACCACTAATTAGTGGAC
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G A C G T A C G T A C G T
G C T A T A G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G T A C G G C T A A G T C

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTAAGCAGCG
CCTAATCCGC-
 A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTAAGCAGCG
TTAATCCG--
 A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTAAGCAGCG----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C T G A G T C C T G A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T