Information for 12-GTTGGCTGGCCCG (Motif 25)

A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G
Reverse Opposite:
A T G C A T C G A C T G T A C G A G T C A G T C T C G A T A C G G T A C A T G C C G T A G T C A G T A C
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.730
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 24.8bp
Average Position of motif in Background45.6 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTTGGCTGGCCCG
CGTGGGTGGTCC-
 A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGCTGGCCCG--
NGTAGGTTGGCATNNN
 A C G T A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTTGGCTGGCCCG
-TTGGCA------
 A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTGGCTGGCCCG
-TTCGGTGGTCGC
 A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G
A C G T C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTGGCTGGCCCG-----
--NNNNTGACCCGGCGCG
 A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTTGGCTGGCCCG
NGCGTGGGCGGR---
 A C G T A C G T A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGCTGGCCCG-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTTGGCTGGCCCG
---GGTTGGCAT-
 A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTGGCTGGCCCG
GGGGGCGGGGCC-
 A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTTGGCTGGCCCG
-TWGTCTGV----
 A C T G A C G T A C G T A T C G A C T G A T G C A G C T A C T G C T A G A G T C G T A C A T G C A T C G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T