Information for 9-GGTCCCTGGCTCT (Motif 18)

C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A C T A G A G T C A G T C C G T A A T C G A C T G A C T G C G T A A G T C A G T C
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.4 +/- 30.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGTCCCTGGCTCT
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCCCTGGCTCT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGTCCCTGGCTCT--
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGTCCCTGGCTCT
NAGGTCANTGACCT-
 A C G T A C G T C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGTCCCTGGCTCT
CTGTTCCTGG----
 A C G T C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGTCCCTGGCTCT
AGGTCTCTAACC--
 A C G T C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGTCCCTGGCTCT
----NTTGGCANN
 C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGTCCCTGGCTCT
GGTCCCGCCC---
 C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGTCCCTGGCTCT
-----TTGGCA--
 C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GGTCCCTGGCTCT-
--TGATTGGCTANN
 C T A G A C T G A C G T A G T C A G T C A T G C A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T