Information for 5-GAGKSTKGCCAGGAGG (Motif 15)

A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G
Reverse Opposite:
A T G C A G T C A C G T T A G C A T G C C G A T A C T G A T C G A G T C G T C A T C G A A T C G T G C A A G T C C G A T A T G C
p-value:1e-11
log p-value:-2.593e+01
Information Content per bp:1.726
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif51.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets48.3 +/- 22.0bp
Average Position of motif in Background51.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GAGKSTKGCCAGGAGG--
------TGCCCNGGGGCA
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGKSTKGCCAGGAGG
-----TTGCCAAG---
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAGKSTKGCCAGGAGG--
------TGCCCTNGGGCA
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAGKSTKGCCAGGAGG-
------GGGCGGGAAGG
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAGKSTKGCCAGGAGG--
------TGCCCTNGGGCA
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGKSTKGCCAGGAGG--
------TGTCAGGGGGCG
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGKSTKGCCAGGAGG-
------GGGCGGGAAGG
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAGKSTKGCCAGGAGG-
-----ATGCCCTGAGGC
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAGKSTKGCCAGGAGG
----BTKGGCGGGAAA
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G
A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAGKSTKGCCAGGAGG
----NTTGGCANN---
 A T C G G C T A A C T G A C G T T A G C A G C T A C G T A C T G A T G C A G T C G C T A A T C G A C T G C G T A C T A G A T C G
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T