Information for 6-GCCGDGGACTGAC (Motif 13)

A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
Reverse Opposite:
T C A G A C G T A T G C G T C A A C T G A C G T A T G C T G A C G T A C A G T C C T A G A C T G A G T C
p-value:1e-11
log p-value:-2.628e+01
Information Content per bp:1.721
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets57.7 +/- 25.7bp
Average Position of motif in Background43.4 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCCGDGGACTGAC
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCGDGGACTGAC
--TGGGGA-----
 A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCGDGGACTGAC
NGCCTGAGGCN---
 A C G T A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCGDGGACTGAC
TGCCTGAGGCN---
 A C G T A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCCGDGGACTGAC--
---GTGGCGTGACNG
 A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C A C G T A C G T
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCGDGGACTGAC
NGCCTNAGGCN---
 A C G T A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCGDGGACTGAC
ATGCCCGGGCATGT-
 A C G T A C G T A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCCGDGGACTGAC
-CCAGGAACAG--
 A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCCGDGGACTGAC
-NCGCGGACGTTG
 A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCCGDGGACTGAC
ANTGCCTGAGGCAAN-
 A C G T A C G T A C G T A C T G A G T C G A T C C T A G C A T G A C T G A T C G G T C A A G T C C A G T T A C G T C G A A G T C
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T