Information for 4-CCGCCAAGAT (Motif 9)

A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T
Reverse Opposite:
G T C A A C G T A G T C G A C T A C G T A C T G A C T G G T A C A C T G A T C G
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.857
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif84.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets48.3 +/- 28.2bp
Average Position of motif in Background51.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCGCCAAGAT
GTCCGCCATTA-
 A C G T A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCGCCAAGAT
-TGCCAA---
 A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCGCCAAGAT
CGTGCCAAG--
 A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCGCCAAGAT-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F7/MA0758.1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCGCCAAGAT
TTTTCCCGCCAAAA-
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCGCCAAGAT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CCGCCAAGAT-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCAAGAT
TTTCCCGCCMAV--
 A C G T A C G T A C G T A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCAAGAT-
GCCGCCATCTTG
 A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

E2F8/MA0865.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCGCCAAGAT
TTTCCCGCCAAA--
 A C G T A C G T A C G T A C G T A T G C G T A C C A T G A G T C A G T C C G T A C T G A C T A G C G T A A C G T
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T