Information for 2-CCGGATAGAC (Motif 2)

T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
Reverse Opposite:
A C T G A C G T A T G C C A G T C T G A A G C T T A G C A G T C T C A G A C T G
p-value:1e-13
log p-value:-3.192e+01
Information Content per bp:1.667
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.86%
Number of Background Sequences with motif330.3
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets47.7 +/- 26.4bp
Average Position of motif in Background48.9 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCGGATAGAC-
-CGTCTAGACA
 T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C A C G T
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

SPDEF/MA0686.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGGATAGAC
ACCCGGATGTA-
 A C G T A C G T T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CCGGATAGAC
AANNATCCGGATGTNN
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCGGATAGAC--
----BCAGACWA
 T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ETV4/MA0764.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCGGATAGAC
ACCGGAAGTA-
 A C G T T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
C T G A T A G C T G A C A T C G A C T G C T G A G C T A T C A G A G C T C T G A A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGGATAGAC
RCCGGAARYN-
 A C G T T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T

ETV2/MA0762.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCGGATAGAC
AACCGGAAATA-
 A C G T A C G T T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A A C G T

ETV5/MA0765.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGGATAGAC
ACCGGAAGTG-
 A C G T T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCGGATAGAC
DCCGGAARYN-
 A C G T T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T

ETV1/MA0761.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGGATAGAC
ACCGGAAGTA-
 A C G T T A G C A G T C T C A G A T C G T C G A G A C T G T C A T A C G T G C A T G A C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T G A A C G T